STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2H2A9Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (348 aa)    
Predicted Functional Partners:
A0A1X2H262
Autophagy-related protein 17.
    
 0.828
A0A1X2HC11
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
   
 0.798
A0A1X2HJM7
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
   
 0.798
A0A1X2HSJ3
P-loop containing nucleoside triphosphate hydrolase protein.
    
  0.589
A0A1X2HJL3
Ornithine aminotransferase.
     
 0.572
A0A1X2HMC6
Kinase-like domain-containing protein.
    
 
 0.558
A0A1X2H796
O-methyltransferase-domain-containing protein.
     
 0.552
A0A1X2HRF4
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
     
 0.541
A0A1X2HRG4
Uncharacterized protein.
     
 0.541
A0A1X2HHJ7
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
   
 
 0.539
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.