STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2H314Glycyl-tRNA synthetase. (558 aa)    
Predicted Functional Partners:
A0A1X2HQE9
Tyrosine--tRNA ligase.
  
 
 0.948
A0A1X2H9H3
DNA polymerase family A-domain-containing protein.
   
 
 0.871
A0A1X2H137
tRNA-binding domain-containing protein.
  
 
 0.856
A0A1X2H1V0
Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.803
A0A1X2H9G7
Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.787
A0A1X2H4M9
Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.765
A0A1X2H9B2
Seryl-tRNA synthetase.
   
  
 0.761
A0A1X2HES2
tRNA synthetases class I, catalytic domain-domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.759
A0A1X2HVR9
tRNA synthetases class I, catalytic domain-domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.756
ALA1
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.
  
 
 0.749
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.