STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2H3B6P-loop containing nucleoside triphosphate hydrolase protein. (230 aa)    
Predicted Functional Partners:
A0A1X2HIT0
Uncharacterized protein.
   
 0.927
A0A1X2HME6
DH domain-containing protein.
   
 0.927
A0A1X2HG22
Dbl homology domain-containing protein.
    
 0.915
A0A1X2HHT0
Uncharacterized protein.
    
 0.915
A0A1X2H322
Uncharacterized protein.
    
 0.847
A0A1X2HEB2
Uncharacterized protein.
    
 0.847
A0A1X2HNQ3
Uncharacterized protein.
    
 0.847
A0A1X2HA93
Uncharacterized protein.
   
 0.823
A0A1X2HAG6
Uncharacterized protein.
   
 0.823
A0A1X2HAQ7
Uncharacterized protein.
   
 0.823
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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