STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2H3C6LMBR1-like membrane protein-domain-containing protein. (552 aa)    
Predicted Functional Partners:
A0A1X2H6U6
ABC transporter transmembrane region 2-domain-containing protein.
    
 0.793
A0A1X2HA37
ABC transporter transmembrane region 2-domain-containing protein.
    
 0.793
A0A1X2H7C0
ABC transporter transmembrane region 2-domain-containing protein.
    
 0.716
A0A1X2HA96
Uncharacterized protein.
    
 0.716
A0A1X2HBI8
ABC transporter transmembrane region 2-domain-containing protein.
    
 0.716
A0A1X2HV35
Uncharacterized protein.
      
 0.512
A0A1X2H637
Corrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
      
 0.501
A0A1X2HA94
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
      
 0.501
A0A1X2HPW7
Uncharacterized protein.
      
 0.497
A0A1X2HUK0
WD40-repeat-containing domain protein.
 
      0.428
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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