STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2H3R7NodB homology domain-containing protein. (490 aa)    
Predicted Functional Partners:
A0A1X2HU73
Uncharacterized protein.
    
 0.834
A0A1X2HUA8
Zn(2)-C6 fungal-type domain-containing protein.
    
 0.834
A0A1X2HA27
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
   
 0.779
A0A1X2HCF1
Protein-tyrosine phosphatase-like protein.
    
 0.733
A0A1X2HEJ7
Protein-tyrosine phosphatase-like protein.
    
 0.733
A0A1X2HDH2
Protein-tyrosine phosphatase-like protein.
    
 0.717
A0A1X2HTP1
Zn_dep_PLPC domain-containing protein.
    
 0.667
A0A1X2HGL9
Histone H3; Belongs to the histone H3 family.
    
 0.604
A0A1X2HIE4
Histone H3; Belongs to the histone H3 family.
    
 0.604
A0A1X2HF79
Nuclear export factor CRM1.
    
  0.579
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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