STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2H3X1Transcriptional repressor TCF25-domain-containing protein. (676 aa)    
Predicted Functional Partners:
A0A1X2H1C8
RING-CH-type domain-containing protein.
   
 
 0.776
A0A1X2H3L2
Fibronectin-binding protein A N-terminus-domain-containing protein.
    
 
 0.749
A0A1X2HLU7
Transitional endoplasmic reticulum ATPase.
   
 
 0.696
A0A1X2HRN2
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the AAA ATPase family.
   
 
 0.696
A0A1X2HBV5
bVLRF1 domain-containing protein.
   
 
 0.590
A0A1X2HPN1
Ubiquitin fusion degradation protein UFD1-domain-containing protein.
    
 
 0.588
A0A1X2H773
NPL4 family-domain-containing protein.
   
 
 0.586
A0A1X2HNS4
Acyl-CoA N-acyltransferase.
    
   0.581
A0A1X2HDH5
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.548
A0A1X2HLF2
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the AAA ATPase family.
   
 
 0.548
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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