STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2H665TBP-domain-containing protein. (137 aa)    
Predicted Functional Partners:
A0A1X2H1X5
Transcription initiation factor IID, 18kD subunit-domain-containing protein.
   
 0.999
A0A1X2H2C4
TAFII55 protein conserved region-domain-containing protein.
    
 0.999
A0A1X2H6B0
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.999
A0A1X2H783
Cyclin-like protein.
   
 0.999
A0A1X2HG33
Cyclin-like protein.
   
 0.999
A0A1X2HHQ9
SANT domain-containing protein.
    
 0.999
A0A1X2HKR5
Transcription initiation factor TFIID component TAF4 family-domain-containing protein.
    
 0.999
A0A1X2HLF8
Transcription initiation factor TFIID subunit A-domain-containing protein.
    
 0.999
A0A1X2HPC4
Transcription initiation factor IID, 31kD subunit-domain-containing protein.
    
 0.999
A0A1X2HQ24
WD40-repeat-containing domain protein.
    
 0.999
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.