STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2H674Mitochondrial small ribosomal subunit Rsm22-domain-containing protein. (484 aa)    
Predicted Functional Partners:
A0A1X2H0A9
Ribosomal protein S5 domain 2-type protein; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.961
A0A1X2HJC5
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.946
A0A1X2HER9
Ribosomal protein S10 domain-containing protein.
    
 
 0.943
A0A1X2H9U3
Ribosomal protein S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
    
   0.942
A0A1X2H4I0
Mitochondrial ribosomal subunit protein-domain-containing protein.
    
 
 0.940
A0A1X2HCF2
Ribosomal protein S2, flavodoxin-like domain-containing protein.
   
 
 0.938
A0A1X2HQJ3
30S ribosomal protein S16.
   
 
 0.927
A0A1X2HCY5
Ribosomal protein S12/S23-domain-containing protein.
   
   0.926
A0A1X2HLH3
Uncharacterized protein.
    
 
 0.920
A0A1X2HVF2
Ribosomal protein S9/S16-domain-containing protein; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.916
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.