STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2H6H9DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (856 aa)    
Predicted Functional Partners:
A0A1X2HV70
S1 motif domain-containing protein.
   
 0.935
A0A1X2HEN6
Ribosomal protein S5 domain 2-type protein.
   
 0.934
A0A1X2HQZ6
Exosome complex component RRP43.
   
 0.931
A0A1X2HIW2
Uncharacterized protein.
   
 0.930
A0A1X2HBQ2
Exosome component 4.
   
 0.928
A0A1X2H3U7
Uncharacterized protein.
   
 0.927
A0A1X2HQ85
Ribosomal protein S5 domain 2-type protein.
   
 0.927
A0A1X2HG99
Ribosomal protein S5 domain 2-type protein.
   
 0.918
A0A1X2HRS9
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.916
A0A1X2HW56
rRNA-processing arch domain-domain-containing protein.
   
 0.888
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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