STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2H6J2P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family. (631 aa)    
Predicted Functional Partners:
A0A1X2H3Q0
PRP1 splicing factor, N-terminal-domain-containing protein.
    
 0.901
A0A1X2H9V1
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.893
A0A1X2HFK0
ATP synthase subunit gamma.
   
 
 0.812
A0A1X2HPD5
Translation initiation factor eIF 4e-like domain-containing protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.804
A0A1X2HW80
Pre-mRNA splicing factor component-domain-containing protein.
    
 0.802
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.797
A0A1X2HA88
Splicing factor 3B subunit 1.
   
 0.763
A0A1X2H2A0
Cryptococcal mannosyltransferase 1-domain-containing protein.
   
 0.759
A0A1X2HP32
MIF4G domain-containing protein.
   
 0.759
A0A1X2H598
Small-subunit processome.
   
 0.744
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.