STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2H6Y7Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family. (555 aa)    
Predicted Functional Partners:
A0A1X2H9S3
t-SNARE.
    
 
 0.991
A0A1X2HFT7
FYVE-type domain-containing protein.
    
 0.991
A0A1X2HV84
t-SNARE.
    
 
 0.943
A0A1X2HF92
Glucose inhibited division protein A-domain-containing protein.
 
      0.900
A0A1X2H2W7
Endoplasmic reticulum vesicle transporter-domain-containing protein.
 
      0.899
A0A1X2HTQ2
Endoplasmic reticulum-golgi intermediate compartment protein.
 
      0.889
A0A1X2HBI0
Snare region anchored in the vesicle membrane C-terminus-domain-containing protein.
   
 
 0.885
A0A1X2HTR0
t-SNARE.
   
 
 0.885
A0A1X2HQY2
Pep3/Vps18/deep orange family-domain-containing protein.
    
 0.876
A0A1X2HT81
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
    
 0.856
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.