STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2H756MT-A70-domain-containing protein; Belongs to the MT-A70-like family. (367 aa)    
Predicted Functional Partners:
A0A1X2HKB3
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
 
      0.800
A0A1X2HMY1
Fe2OG dioxygenase domain-containing protein.
   
  
 0.524
A0A1X2HMJ0
MT-A70-domain-containing protein; Belongs to the MT-A70-like family.
      
 0.515
A0A1X2H569
Methyltransf_21 domain-containing protein.
      
 0.514
A0A1X2HQP3
S-adenosyl-L-methionine-dependent methyltransferase.
      
 0.509
A0A1X2HI09
U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase; Belongs to the methyltransferase superfamily. METTL16/RlmF family.
      
 0.499
A0A1X2HCZ1
Uncharacterized protein.
      
 0.477
A0A1X2H6D7
Uncharacterized protein; Belongs to the MT-A70-like family.
      
 0.475
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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