STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2H829HPP family-domain-containing protein. (239 aa)    
Predicted Functional Partners:
A0A1X2HIT0
Uncharacterized protein.
    
 0.863
A0A1X2HME6
DH domain-containing protein.
    
 0.863
A0A1X2HNR1
WD40-repeat-containing domain protein.
   
 0.823
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.800
A0A1X2HVB9
Rix1 complex component.
   
 0.785
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.759
A0A1X2HES5
Calponin homology domain-containing protein.
   
 0.738
A0A1X2HLI5
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.720
A0A1X2GZW6
Pre-mRNA cleavage complex II protein Clp1-domain-containing protein.
   
 0.695
A0A1X2HEN1
Las1-like-domain-containing protein.
    
  0.681
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.