STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2H847Biogenesis of lysosome-related organelles complex-1 subunit 2-domain-containing protein. (178 aa)    
Predicted Functional Partners:
A0A1X2HLC8
Biogenesis of lysosome-related organelles complex 1 subunit 1-like protein.
   
 
 0.911
A0A1X2HSU5
Uncharacterized protein.
   
 
 0.906
A0A1X2HEC4
Uncharacterized protein.
    
 
 0.689
A0A1X2H8C6
KxDL domain-containing protein.
    
 
 0.562
A0A1X2H229
PX domain-containing protein.
    
 
 0.514
A0A1X2HC78
PX domain-containing protein.
    
 
 0.514
A0A1X2HRH5
PX domain-containing protein.
    
 
 0.514
A0A1X2H367
ADP-ribosylation factor-like protein 8B; Belongs to the small GTPase superfamily. Arf family.
   
  
 0.497
A0A1X2H543
Deoxyribose-phosphate aldolase.
      
 0.493
A0A1X2HWH8
Adaptin N terminal region-domain-containing protein.
    
 
 0.456
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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