STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2H8J1XAP5, circadian clock regulator-domain-containing protein. (333 aa)    
Predicted Functional Partners:
A0A1X2HSN0
Pre-mRNA splicing Prp18-interacting factor-domain-containing protein.
   
 
  0.789
A0A1X2H004
WD40-repeat-containing domain protein.
   
 
  0.757
A0A1X2HEM4
Hepatocellular carcinoma-associated antigen 59-domain-containing protein.
    
  0.715
A0A1X2HJ60
Smg-4/UPF3 family-domain-containing protein.
   
  0.708
A0A1X2HMV5
Ras-induced vulval development antagonist-domain-containing protein.
   
 
  0.688
A0A1X2H9Q1
RRM domain-containing protein.
   
  0.679
A0A1X2HDC8
RRM domain-containing protein.
   
  0.679
A0A1X2HTN7
RRM domain-containing protein.
   
  0.679
A0A1X2HNN0
Uncharacterized protein.
    
  0.678
A0A1X2HD51
RRM domain-containing protein.
   
  0.668
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.