STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2H902Uncharacterized protein. (1305 aa)    
Predicted Functional Partners:
A0A1X2HBG5
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 0.871
A0A1X2H3C2
Cullin; Belongs to the cullin family.
    
 0.842
A0A1X2HIG7
Cullin; Belongs to the cullin family.
    
 0.799
A0A1X2HP74
Uncharacterized protein.
   
 0.789
A0A1X2H6H3
Uncharacterized protein.
    
  0.665
A0A1X2HPW4
Histone H2A; Belongs to the histone H2A family.
    
  0.665
A0A1X2HQ05
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.665
A0A1X2HTI8
HSP20-like chaperone.
    
  0.665
A0A1X2HIE1
Histone H2B; Belongs to the histone H2B family.
    
 0.664
A0A1X2HPX1
Histone H2B; Belongs to the histone H2B family.
    
 0.664
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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