STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HB87Peptidyl-tRNA hydrolase PTH2-domain-containing protein. (192 aa)    
Predicted Functional Partners:
A0A1X2H645
Ubiquitin carboxyl-terminal hydrolase.
    
  0.657
A0A1X2H6W7
USP domain-containing protein; Belongs to the peptidase C19 family.
    
  0.657
A0A1X2HHE0
Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.
    
  0.656
A0A1X2HUU4
Peptidylprolyl isomerase.
    
  0.653
A0A1X2HHF7
EF-hand domain-containing protein.
    
  0.634
A0A1X2H8T8
Ubiquitin carboxyl-terminal hydrolase.
    
  0.628
A0A1X2HDE3
Eukaryotic porin/Tom40.
   
 
  0.619
A0A1X2H8F0
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
   
 
 0.596
A0A1X2HNS2
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
   
 
 0.596
A0A1X2HEC6
Mitochondrial outer membrane translocase complex, subunit Tom20 domain-containing protein.
   
 
 0.588
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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