STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HC57JmjC domain, hydroxylase-domain-containing protein. (668 aa)    
Predicted Functional Partners:
A0A1X2HGL9
Histone H3; Belongs to the histone H3 family.
    
 0.998
A0A1X2HIE4
Histone H3; Belongs to the histone H3 family.
    
 0.998
A0A1X2HRW9
Histone H2A; Belongs to the histone H2A family.
    
 0.989
A0A1X2HH68
SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.984
A0A1X2HFL2
Ribosomal protein S27a-domain-containing protein.
    
  0.983
A0A1X2HI67
Uncharacterized protein.
    
  0.983
A0A1X2H6S6
Metallo-dependent phosphatase-like protein; Belongs to the MRE11/RAD32 family.
    
  0.977
A0A1X2HGS9
Uncharacterized protein.
    
  0.976
A0A1X2H895
Uncharacterized protein.
    
 0.883
A0A1X2HFR7
Dihydrofolate synthetase; Belongs to the folylpolyglutamate synthase family.
 
  
   0.871
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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