STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HC95Uncharacterized protein. (71 aa)    
Predicted Functional Partners:
A0A1X2HH68
SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.903
A0A1X2HBG5
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 
 0.874
A0A1X2HF13
RRM domain-containing protein.
    
 
 0.869
A0A1X2HMD3
Mago nashi protein.
    
 
 0.869
A0A1X2HH09
Phosphoribosylglycinamide synthetase.
   
 0.844
A0A1X2HUI5
Phosphoribosylglycinamide formyltransferase.
   
 0.844
A0A1X2HQS3
S1-like domain-containing protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
    
 
 0.839
A0A1X2HAB4
Eukaryotic translation initiation factor 5A.
    
 
 0.764
A0A1X2HVE9
Uncharacterized protein.
    
 
 0.617
A0A1X2HP74
Uncharacterized protein.
   
 
 0.602
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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