STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HCA7P-loop containing nucleoside triphosphate hydrolase protein. (222 aa)    
Predicted Functional Partners:
A0A1X2H1T3
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.820
A0A1X2GZD6
DNA-directed RNA polymerase I, II, and III subunit RPABC5.
    
 0.810
A0A1X2H1D3
RNA polymerase, subunit omega/K/RPB6.
    
 0.810
A0A1X2H758
RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein.
    
 0.810
A0A1X2HD59
DNA-directed RNA polymerase.
    
 0.810
A0A1X2HED9
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.810
A0A1X2HKQ4
HRDC-like protein.
    
 0.810
A0A1X2HP54
RNA polymerase.
    
 0.810
A0A1X2HP81
RNA polymerase.
    
 0.810
A0A1X2HV76
DNA directed RNA polymerase.
    
 0.810
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.