STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HCY6Gcd10p family-domain-containing protein. (340 aa)    
Predicted Functional Partners:
A0A1X2H372
tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.
   
 0.999
A0A1X2HST1
S-adenosyl-L-methionine-dependent methyltransferase.
   
 0.990
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
   
  
 0.924
A0A1X2H8U0
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the DEAD box helicase family.
   
   0.876
A0A1X2HN97
P-loop containing nucleoside triphosphate hydrolase protein.
   
   0.876
A0A1X2HTI0
RNA helicase.
   
   0.870
A0A1X2H8M0
WD40-repeat-containing domain protein.
   
    0.865
A0A1X2HS43
Brix domain-domain-containing protein.
   
  
 0.858
A0A1X2H5E6
Uncharacterized protein.
   
    0.853
A0A1X2HNU9
Uncharacterized protein.
   
   0.844
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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