STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HEW3Pyridoxal phosphate-dependent transferase. (433 aa)    
Predicted Functional Partners:
A0A1X2HHJ7
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
    
 0.902
A0A1X2HLX2
Aspartate/glutamate/uridylate kinase; In the N-terminal section; belongs to the acetylglutamate kinase family.
  
 
 0.875
A0A1X2HFE3
Tryptophan synthase.
  
 
 0.851
A0A1X2HHI6
Aspartate aminotransferase.
   
 0.824
A0A1X2HRF1
Homoserine dehydrogenase.
  
 0.783
A0A1X2HCS4
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
  
 0.759
A0A1X2H8P6
Anthranilate synthase component I.
   
 0.745
A0A1X2HMI6
Citrate synthase; Belongs to the citrate synthase family.
  
 0.743
A0A1X2HF17
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.740
A0A1X2HM46
Pyridoxal-dependent decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.740
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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