STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HF86Cornichon. (137 aa)    
Predicted Functional Partners:
A0A1X2H4X2
Emp24/gp25L/p24 family/GOLD-domain-containing protein.
   
 0.897
A0A1X2HP29
Supernatant protein factor C-terminal domain-containing protein.
    
 0.817
A0A1X2H5W1
GRASP55/65 PDZ-like domain-domain-containing protein.
   
 0.809
A0A1X2H8C1
t-SNARE.
    
 0.771
A0A1X2H8D1
Small COPII coat GTPase; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.761
A0A1X2HUU3
Uncharacterized protein.
    
 0.761
A0A1X2HVT2
Uncharacterized protein.
    
 0.761
A0A1X2H9R6
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
    
 0.744
A0A1X2HW78
WD_REPEATS_REGION domain-containing protein.
     
 0.741
A0A1X2H7G5
Uncharacterized protein.
     
 0.737
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.