STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HGB1Uncharacterized protein. (220 aa)    
Predicted Functional Partners:
A0A1X2H724
Translation initiation factor IF-2.
   
 0.726
A0A1X2H4I0
Mitochondrial ribosomal subunit protein-domain-containing protein.
   
 0.610
A0A1X2HAZ5
Tr-type G domain-containing protein.
   
 0.592
A0A1X2H0A9
Ribosomal protein S5 domain 2-type protein; Belongs to the universal ribosomal protein uS5 family.
   
  0.558
A0A1X2HER9
Ribosomal protein S10 domain-containing protein.
   
  0.552
A0A1X2HVF2
Ribosomal protein S9/S16-domain-containing protein; Belongs to the universal ribosomal protein uS9 family.
    
 0.552
A0A1X2HLH3
Uncharacterized protein.
    
  0.549
A0A1X2H6A7
30S ribosomal protein S6.
    
  0.546
A0A1X2HI18
Uncharacterized protein.
    
  0.546
A0A1X2HQJ3
30S ribosomal protein S16.
    
  0.546
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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