STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HI10Armadillo-type protein. (553 aa)    
Predicted Functional Partners:
A0A1X2HS43
Brix domain-domain-containing protein.
   
 
 0.991
A0A1X2H1V5
Brix domain-domain-containing protein.
   
 
 0.989
A0A1X2H7N0
NOL1/NOP2/sun family-domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.988
A0A1X2HE77
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.988
A0A1X2HGW3
Eukaryotic rRNA processing protein EBP2-domain-containing protein.
   
 
 0.986
A0A1X2H0V6
RRM domain-containing protein.
   
 
 0.984
A0A1X2HE21
Uncharacterized protein.
   
 
 0.983
A0A1X2HTI0
RNA helicase.
   
 
 0.972
A0A1X2HIC9
Nucleolar protein NOP58.
   
   0.968
A0A1X2HQK5
Brix domain-domain-containing protein.
   
   0.967
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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