STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HJI6Zn(2)-C6 fungal-type domain-containing protein. (242 aa)    
Predicted Functional Partners:
A0A1X2H6Z0
3-oxo-5-alpha-steroid 4-dehydrogenase-domain-containing protein.
   
 0.867
A0A1X2HGG1
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
     
 0.750
A0A1X2HAB2
Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.
   
 0.740
A0A1X2HGY3
Uncharacterized protein.
   
 0.740
A0A1X2HN65
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
 
 0.603
A0A1X2HUU4
Peptidylprolyl isomerase.
    
 
 0.503
A0A1X2H3E5
BZIP domain-containing protein.
  
 
 
 0.499
A0A1X2HF79
Nuclear export factor CRM1.
    
 
 0.454
A0A1X2HJ21
Armadillo-type protein.
    
 
 0.454
A0A1X2H097
DUF2183 domain-containing protein.
    
  0.441
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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