STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HKR8Uncharacterized protein. (202 aa)    
Predicted Functional Partners:
A0A1X2H4Z2
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.793
A0A1X2HLD6
Uncharacterized protein; Belongs to the actin family.
    
 0.792
A0A1X2HRW9
Histone H2A; Belongs to the histone H2A family.
    
 0.787
A0A1X2H1D3
RNA polymerase, subunit omega/K/RPB6.
   
 0.783
A0A1X2HAU3
Ribonuclease H-like domain-containing protein.
   
 
 0.760
A0A1X2HUT2
Uncharacterized protein.
   
 0.754
A0A1X2HCV6
YL1 nuclear protein C-terminal domain-domain-containing protein.
    
 0.739
A0A1X2HM21
Ubiquitin-related domain-containing protein.
    
 0.737
A0A1X2HD59
DNA-directed RNA polymerase.
   
  0.724
A0A1X2H3Z1
ERCC4 domain-containing protein.
    
 0.722
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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