A0A1X2HMA0 protein (Syncephalastrum racemosum)

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Predicted Interactions

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A0A1X2HMA0

Ceramide very long chain fatty acid hydroxylase; Ceramide hydroxylase involved in the hydroxylation of sphingolipid-associated very long chain fatty acids. Postulated to hydroxylate the very long chain fatty acid of dihydroceramides and phytoceramides at C-2; Belongs to the sterol desaturase family. SCS7 subfamily. (346 aa)

Predicted Functional Partners:

A0A1X2H225

0.963

A0A1X2H887

0.937

A0A1X2H2H8

0.926

A0A1X2GZP8

0.846

A0A1X2HDH3

0.839

A0A1X2HGG1

0.837

A0A1X2HA57

0.819

A0A1X2HF79

0.760

A0A1X2HJ21

0.760

A0A1X2HCV7

0.654

Your Current Organism:

Syncephalastrum racemosum

NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1X2GZP8	A0A1X2H225	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	0.999
A0A1X2GZP8	A0A1X2H2H8	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	Oxidoreductase, molybdopterin-binding domain-containing protein.	0.432
A0A1X2GZP8	A0A1X2HGG1	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.760
A0A1X2GZP8	A0A1X2HMA0	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	Ceramide very long chain fatty acid hydroxylase; Ceramide hydroxylase involved in the hydroxylation of sphingolipid-associated very long chain fatty acids. Postulated to hydroxylate the very long chain fatty acid of dihydroceramides and phytoceramides at C-2; Belongs to the sterol desaturase family. SCS7 subfamily.	0.846
A0A1X2H225	A0A1X2GZP8	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	0.999
A0A1X2H225	A0A1X2H2H8	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	Oxidoreductase, molybdopterin-binding domain-containing protein.	0.494
A0A1X2H225	A0A1X2HGG1	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.782
A0A1X2H225	A0A1X2HMA0	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	Ceramide very long chain fatty acid hydroxylase; Ceramide hydroxylase involved in the hydroxylation of sphingolipid-associated very long chain fatty acids. Postulated to hydroxylate the very long chain fatty acid of dihydroceramides and phytoceramides at C-2; Belongs to the sterol desaturase family. SCS7 subfamily.	0.963
A0A1X2H2H8	A0A1X2GZP8	Oxidoreductase, molybdopterin-binding domain-containing protein.	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	0.432
A0A1X2H2H8	A0A1X2H225	Oxidoreductase, molybdopterin-binding domain-containing protein.	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	0.494
A0A1X2H2H8	A0A1X2H887	Oxidoreductase, molybdopterin-binding domain-containing protein.	Fatty acid hydroxylase superfamily-domain-containing protein; Belongs to the sterol desaturase family.	0.516
A0A1X2H2H8	A0A1X2HA57	Oxidoreductase, molybdopterin-binding domain-containing protein.	Cytochrome b5-like heme/steroid binding domain-containing protein; Belongs to the cytochrome b5 family.	0.942
A0A1X2H2H8	A0A1X2HCV7	Oxidoreductase, molybdopterin-binding domain-containing protein.	Uncharacterized protein.	0.886
A0A1X2H2H8	A0A1X2HF79	Oxidoreductase, molybdopterin-binding domain-containing protein.	Nuclear export factor CRM1.	0.422
A0A1X2H2H8	A0A1X2HGG1	Oxidoreductase, molybdopterin-binding domain-containing protein.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.927
A0A1X2H2H8	A0A1X2HJ21	Oxidoreductase, molybdopterin-binding domain-containing protein.	Armadillo-type protein.	0.422
A0A1X2H2H8	A0A1X2HMA0	Oxidoreductase, molybdopterin-binding domain-containing protein.	Ceramide very long chain fatty acid hydroxylase; Ceramide hydroxylase involved in the hydroxylation of sphingolipid-associated very long chain fatty acids. Postulated to hydroxylate the very long chain fatty acid of dihydroceramides and phytoceramides at C-2; Belongs to the sterol desaturase family. SCS7 subfamily.	0.926
A0A1X2H887	A0A1X2H2H8	Fatty acid hydroxylase superfamily-domain-containing protein; Belongs to the sterol desaturase family.	Oxidoreductase, molybdopterin-binding domain-containing protein.	0.516
A0A1X2H887	A0A1X2HGG1	Fatty acid hydroxylase superfamily-domain-containing protein; Belongs to the sterol desaturase family.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.760
A0A1X2H887	A0A1X2HMA0	Fatty acid hydroxylase superfamily-domain-containing protein; Belongs to the sterol desaturase family.	Ceramide very long chain fatty acid hydroxylase; Ceramide hydroxylase involved in the hydroxylation of sphingolipid-associated very long chain fatty acids. Postulated to hydroxylate the very long chain fatty acid of dihydroceramides and phytoceramides at C-2; Belongs to the sterol desaturase family. SCS7 subfamily.	0.937

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Network Stats

number of nodes:

11

number of edges:

41

average node degree:

7.45

avg. local clustering coefficient:

0.838

expected number of edges:

28

PPI enrichment p-value:

0.0102

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0003735

Structural constituent of ribosome

4 of 55

1.41

0.88

0.0102

GO:0019843

rRNA binding

3 of 42

1.4

0.64

0.0459

GO:0003723

RNA binding

4 of 110

1.11

0.56

0.0459

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0022625

Cytosolic large ribosomal subunit

4 of 23

1.78

1.88

7.73e-05

GO:0032991

Protein-containing complex

5 of 227

0.89

0.67

0.0036

GO:0005829

Cytosol

5 of 312

0.75

0.51

0.0117

Reference Publications (PubMed)

publication

(year) title

count in network

strength

signal

false discovery rate

PMID:26617599

(2015) Comparative Genomic Insights into Ecophysiology of Neutrophilic, Microaerophilic Iron Oxidizing Bacteria.

3 of 16

1.82

0.98

0.0117

PMID:28083017

(2016) Distribution of Hydrogenases in Cyanobacteria: A Phylum-Wide Genomic Survey.

3 of 19

1.74

0.97

0.0117

PMID:36545193

(2022) Characterizing corn-straw-degrading actinomycetes and evaluating application efficiency in straw-returning experiments.

3 of 29

1.56

0.83

0.0195

PMID:21936919

(2011) Genomic insights into an obligate epibiotic bacterial predator: Micavibrio aeruginosavorus ARL-13.

3 of 32

1.52

0.82

0.0195

PMID:19148287

(2009) Complete genome sequence of the aerobic CO-oxidizing thermophile Thermomicrobium roseum.

3 of 31

1.53

0.82

0.0195

(more ...)

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:1368

HotDog domain superfamily, and Epoxide hydrolase-like

3 of 6

2.24

1.84

0.00030

CL:1322

Mixed, incl. Lipid oxidation, and Acyl-CoA dehydrogenase, middle domain

4 of 29

1.68

1.59

0.00030

CL:1250

Mixed, incl. Fatty acid metabolic process, and Carbon fixation pathways in prokaryotes

6 of 93

1.35

1.43

8.61e-05

CL:1252

Carbon fixation pathways in prokaryotes, and Fatty acid metabolic process

5 of 64

1.44

1.39

0.00028

CL:148

Cytosolic large ribosomal subunit, and Small ribosomal subunit

3 of 23

1.66

1.1

0.0050

(more ...)

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

cau03010

Ribosome

4 of 55

1.41

1.15

0.0016

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0036125

Fatty acid beta-oxidation multienzyme complex

2 of 5

2.15

0.76

0.0393

GOCC:0022625

Cytosolic large ribosomal subunit

2 of 5

2.15

0.76

0.0393

GOCC:0005840

Ribosome

3 of 39

1.43

0.67

0.0393

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0689

Ribosomal protein

4 of 53

1.42

1.09

0.0027

KW-0699

rRNA-binding

3 of 39

1.43

0.86

0.0130

KW-0276

Fatty acid metabolism

2 of 13

1.73

0.72

0.0398

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF16113

Enoyl-CoA hydratase/isomerase

3 of 7

2.18

1.53

0.0012

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