STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HMV4Uncharacterized protein. (560 aa)    
Predicted Functional Partners:
A0A1X2HQY3
Spindle pole body component.
    
  0.764
A0A1X2HCX2
Spindle pole body component.
    
 0.720
A0A1X2H943
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.703
A0A1X2H5V7
Spindle pole body component.
    
 0.682
A0A1X2HS99
Spindle pole body component.
    
 0.673
A0A1X2HSV2
Spindle pole body component.
    
 0.673
A0A1X2HVK2
DASH complex subunit Ask1-domain-containing protein.
    
 0.673
A0A1X2HGL9
Histone H3; Belongs to the histone H3 family.
    
 0.630
A0A1X2HIE4
Histone H3; Belongs to the histone H3 family.
    
 0.630
A0A1X2HIB2
WD40-repeat-containing domain protein.
    
 0.568
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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