STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HP33Pre-mRNA-splicing factor of RES complex-domain-containing protein. (423 aa)    
Predicted Functional Partners:
A0A1X2H6X5
RRM domain-containing protein.
   
 0.997
A0A1X2HW80
Pre-mRNA splicing factor component-domain-containing protein.
  
 
 
 0.993
A0A1X2HN34
WD40-repeat-containing domain protein.
    
 
 0.989
A0A1X2HNY0
SMAD/FHA domain-containing protein.
   
 0.989
A0A1X2H768
Sec63 Brl domain-domain-containing protein.
    
 
 0.988
A0A1X2H866
Uncharacterized protein.
    
 
 0.987
A0A1X2HTY6
Splicing factor, Prp19-binding domain-domain-containing protein.
   
   0.982
A0A1X2H004
WD40-repeat-containing domain protein.
    
 
 0.966
A0A1X2H5A1
PSP domain-containing protein.
    
 
 0.966
A0A1X2HPD1
Armadillo-type protein.
   
 
 0.965
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.