STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HPB5Uncharacterized protein. (218 aa)    
Predicted Functional Partners:
A0A1X2H163
Uncharacterized protein.
   
 
 0.796
A0A1X2HA64
Uncharacterized protein.
   
 
 0.796
A0A1X2H8M6
Ubiquitin carboxyl-terminal hydrolase.
     
 0.697
A0A1X2H8D8
Ubiquitin-related domain-containing protein.
    
 0.695
A0A1X2HIW8
Ubiquitin-related domain-containing protein.
    
 0.695
A0A1X2HRK9
Ubiquitin-related domain-containing protein.
    
 0.695
A0A1X2HFL2
Ribosomal protein S27a-domain-containing protein.
    
 0.675
A0A1X2HAT6
Mysoin-binding motif of peroxisomes-domain-containing protein.
    
  0.667
A0A1X2HR54
Sorting nexin-3.
    
 0.667
A0A1X2HTZ9
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
    
  0.667
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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