STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HPF4Uncharacterized protein. (961 aa)    
Predicted Functional Partners:
A0A1X2HIT0
Uncharacterized protein.
   
 0.760
A0A1X2HME6
DH domain-containing protein.
   
 0.760
A0A1X2H764
Glycerophosphoryl diester phosphodiesterase family-domain-containing protein.
   
  0.666
A0A1X2HGJ8
Glycerophosphoryl diester phosphodiesterase family-domain-containing protein.
   
  0.666
A0A1X2HG22
Dbl homology domain-containing protein.
    
  0.653
A0A1X2HHT0
Uncharacterized protein.
    
  0.653
A0A1X2HGL5
Putative intracellular protein transport-related protein; Belongs to the adaptor complexes medium subunit family.
    
 0.614
A0A1X2HUM8
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
  0.583
A0A1X2H146
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
  0.543
A0A1X2HIV3
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
  0.543
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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