STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HQ54Uncharacterized protein. (509 aa)    
Predicted Functional Partners:
A0A1X2HIT0
Uncharacterized protein.
     
 0.826
A0A1X2HME6
DH domain-containing protein.
     
 0.826
A0A1X2H1M6
Coth protein-domain-containing protein.
    
 0.753
A0A1X2HET1
Leuk-A4-hydro_C domain-containing protein.
   
 0.674
A0A1X2HHT4
Aminopeptidase.
   
 0.670
A0A1X2H781
FAS1 domain-containing protein.
   
 0.669
A0A1X2HVC4
Uncharacterized protein.
   
 0.669
A0A1X2HA27
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
     
 0.659
A0A1X2HJ40
Longin-like domain-containing protein; Belongs to the synaptobrevin family.
   
  0.632
A0A1X2HP42
P-loop containing nucleoside triphosphate hydrolase protein.
    
  0.631
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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