STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HRP5WD40-repeat-containing domain protein. (501 aa)    
Predicted Functional Partners:
A0A1X2HN65
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
 0.944
A0A1X2HIG7
Cullin; Belongs to the cullin family.
    
 0.937
A0A1X2HSK1
RING-type domain-containing protein.
    
 0.868
A0A1X2H3C2
Cullin; Belongs to the cullin family.
    
 0.841
A0A1X2HWL5
Translation protein SH3-like domain-containing protein.
    
 0.795
A0A1X2H7S1
NUDIX hydrolase domain-like protein.
    
  0.759
A0A1X2HNP8
Cell division control protein; Belongs to the CDC6/cdc18 family.
    
 0.759
A0A1X2HI67
Uncharacterized protein.
    
  0.755
A0A1X2H3D2
Ubiquitin-like protein.
    
 0.747
A0A1X2HB07
60S ribosomal protein L2.
    
  0.717
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.