STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HRQ3Nup133 N terminal like-domain-containing protein. (973 aa)    
Predicted Functional Partners:
A0A1X2HP74
Uncharacterized protein.
   
 0.999
A0A1X2HGX0
Nucleoporin Nup186/Nup192/Nup205.
   
 0.991
A0A1X2HVR1
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.976
A0A1X2H4E9
Nucleoporin autopeptidase-domain-containing protein.
   
 0.974
A0A1X2HCI7
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.973
A0A1X2HD37
WD40-repeat-containing domain protein; Belongs to the WD repeat SEC13 family.
   
 0.972
A0A1X2HMU5
WD40 repeat-like protein; Belongs to the WD repeat SEC13 family.
    
 0.970
A0A1X2H279
Uncharacterized protein.
   
 0.968
A0A1X2HNA7
Nsp1-like C-terminal region-domain-containing protein.
   
 0.966
A0A1X2H5E7
Nucleoporin subcomplex protein binding to Pom34-domain-containing protein.
   
 0.962
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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