STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HS08ANK_REP_REGION domain-containing protein. (1219 aa)    
Predicted Functional Partners:
A0A1X2HGG1
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
 
 0.771
A0A1X2HPN1
Ubiquitin fusion degradation protein UFD1-domain-containing protein.
    
 
 0.679
A0A1X2GYZ8
Uncharacterized protein.
    
   0.674
A0A1X2H777
WD40-repeat-containing domain protein.
    
   0.674
A0A1X2HLU7
Transitional endoplasmic reticulum ATPase.
    
 
 0.615
A0A1X2HRN2
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the AAA ATPase family.
    
 
 0.615
A0A1X2HBN0
E3 ubiquitin-protein ligase.
    
 
 0.497
A0A1X2HRR1
E3 ubiquitin-protein ligase.
    
 
 0.497
A0A1X2HK24
Transcription factor IIIC subunit delta N-term-domain-containing protein.
    
 
 0.472
A0A1X2HDH5
P-loop containing nucleoside triphosphate hydrolase protein.
    
 
 0.466
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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