STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HS73ER membrane protein complex subunit 4; Belongs to the EMC4 family. (171 aa)    
Predicted Functional Partners:
A0A1X2GZT2
ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family.
   
 
 0.994
A0A1X2HVN1
EMC1_C domain-containing protein.
    
 
 0.991
A0A1X2HPC1
Uncharacterized protein.
   
 
 0.978
A0A1X2HKS2
DUF2012 domain-containing protein.
   
 
 0.972
A0A1X2HAU1
Magnesium transporter.
   
 
 0.965
A0A1X2H7R6
TPR_REGION domain-containing protein.
   
 
 0.944
A0A1X2HAX8
MPN domain-containing protein.
   
 
 0.942
A0A1X2HFI4
Ubiquitin-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
    
   0.942
A0A1X2HJJ5
Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
    
   0.942
A0A1X2H7R1
Uncharacterized protein.
   
 
 0.936
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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