STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HTI3Translation protein SH3-like domain-containing protein. (180 aa)    
Predicted Functional Partners:
A0A1X2H0A5
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.999
A0A1X2H0R6
Uncharacterized protein.
  
 
 0.999
A0A1X2H267
Ribosomal L28 family-domain-containing protein.
  
 
 0.999
A0A1X2H5I9
Uncharacterized protein.
   
 
 0.999
A0A1X2H6A7
30S ribosomal protein S6.
   
 
 0.999
A0A1X2HJI7
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.999
A0A1X2HMF4
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.999
A0A1X2HQJ3
30S ribosomal protein S16.
  
 
 0.999
A0A1X2HRT0
Ribosomal protein L7/L12 C-terminal domain-domain-containing protein.
  
 
 0.999
A0A1X2HTQ8
50S ribosomal protein L33.
  
 
 0.999
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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