STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HVF4P-loop containing nucleoside triphosphate hydrolase protein. (606 aa)    
Predicted Functional Partners:
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.897
A0A1X2H165
GNL3L/Grn1 putative GTPase-domain-containing protein.
  
  0.822
A0A1X2HFK6
P-loop containing nucleoside triphosphate hydrolase protein.
  
  0.822
A0A1X2HGW3
Eukaryotic rRNA processing protein EBP2-domain-containing protein.
   
 0.819
A0A1X2HVR4
Uncharacterized protein.
   
 0.819
A0A1X2HW56
rRNA-processing arch domain-domain-containing protein.
   
 0.814
A0A1X2HA88
Splicing factor 3B subunit 1.
   
 0.810
A0A1X2HC37
Uncharacterized protein.
   
 0.805
A0A1X2HJ37
Ribosomal RNA assembly protein mis3.
   
 0.805
A0A1X2HGR0
Uncharacterized protein.
   
 0.801
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.