STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HVV8Dihydroorotase, homodimeric type. (353 aa)    
Predicted Functional Partners:
A0A1X2HW51
Dihydroorotate dehydrogenase (fumarate); Catalyzes the conversion of dihydroorotate to orotate with fumarate as the electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily.
  
 
 0.986
A0A1X2H854
Uncharacterized protein.
   
 
 0.945
A0A1X2HCH4
Isoaspartyl dipeptidase-like protein.
   
 
 0.928
A0A1X2HI51
Orotate phosphoribosyltransferase.
  
 0.790
A0A1X2HFF0
Orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family.
  
 0.762
A0A1X2HDL2
Amidohydrolase.
    
 0.724
A0A1X2HL19
Uncharacterized protein.
    
 0.724
A0A1X2HP70
Amidohydro-rel domain-containing protein.
    
 0.724
A0A1X2HQF0
Allantoinase.
    
 0.724
A0A1X2HE35
Amidophosphoribosyltransferase.
  
  
 0.653
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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