STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X2HW09Chitin deacetylase. (435 aa)    
Predicted Functional Partners:
A0A1X2HIT0
Uncharacterized protein.
    
 0.781
A0A1X2HME6
DH domain-containing protein.
    
 0.781
A0A1X2HDG6
D-ser_dehydrat domain-containing protein.
    
 0.746
A0A1X2H6S6
Metallo-dependent phosphatase-like protein; Belongs to the MRE11/RAD32 family.
    
 0.729
A0A1X2H6F1
Vaculolar membrane protein-domain-containing protein.
    
 0.698
A0A1X2HFB8
Vaculolar membrane protein-domain-containing protein.
    
 0.698
A0A1X2HVG5
Vaculolar membrane protein-domain-containing protein.
    
 0.698
A0A1X2HDI7
MHYT domain-containing protein.
    
 0.696
A0A1X2HMP8
MHYT domain-containing protein.
    
 0.696
A0A1X2HTP1
Zn_dep_PLPC domain-containing protein.
    
 0.687
Your Current Organism:
Syncephalastrum racemosum
NCBI taxonomy Id: 13706
Other names: S. racemosum, fungal sp. RS07OS
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