STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MHA01_21710Unannotated protein. (91 aa)    
Predicted Functional Partners:
panF
Unannotated protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.961
MHA01_21700
Unannotated protein.
       0.499
rpoE
Unannotated protein; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family.
       0.467
MHA01_02670
Unannotated protein; Belongs to the UPF0435 family.
  
     0.418
MHA01_25350
Unannotated protein.
  
     0.416
yjbC
Unannotated protein.
  
     0.414
MHA01_21330
Unannotated protein.
  
     0.402
Your Current Organism:
Marinococcus halophilus
NCBI taxonomy Id: 1371
Other names: ATCC 27964, CCM 2706, CIP 104819, DSM 20408, IAM 12844, JCM 2479, KCTC 2843, LMG 17439, LMG:17439, NBRC 102359, Planococcus halophilus, strain HK 718
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.