Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MHA01_07660 | MHA01_24550 | GCA_900166605_02865 | GCA_900166605_01864 | Unannotated protein. | Unannotated protein; Belongs to the UbiD family. | 0.718 |
MHA01_07660 | bsdB | GCA_900166605_02865 | GCA_900166605_00564 | Unannotated protein. | Unannotated protein; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for phenolic acid decarboxylase. | 0.726 |
MHA01_08090 | MHA01_14260 | GCA_900166605_02908 | GCA_900166605_01423 | Unannotated protein; Belongs to the UbiA prenyltransferase family. | Unannotated protein. | 0.605 |
MHA01_08090 | MHA01_24550 | GCA_900166605_02908 | GCA_900166605_01864 | Unannotated protein; Belongs to the UbiA prenyltransferase family. | Unannotated protein; Belongs to the UbiD family. | 0.941 |
MHA01_08090 | bsdB | GCA_900166605_02908 | GCA_900166605_00564 | Unannotated protein; Belongs to the UbiA prenyltransferase family. | Unannotated protein; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for phenolic acid decarboxylase. | 0.914 |
MHA01_08090 | mqnA | GCA_900166605_02908 | GCA_900166605_02907 | Unannotated protein; Belongs to the UbiA prenyltransferase family. | Unannotated protein; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2). | 0.934 |
MHA01_08090 | mqnC | GCA_900166605_02908 | GCA_900166605_02007 | Unannotated protein; Belongs to the UbiA prenyltransferase family. | Unannotated protein; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2). | 0.820 |
MHA01_08090 | mqnD | GCA_900166605_02908 | GCA_900166605_01433 | Unannotated protein; Belongs to the UbiA prenyltransferase family. | Unannotated protein; Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2); Belongs to the MqnA/MqnD family. MqnD subfamily. | 0.811 |
MHA01_08090 | mqnE | GCA_900166605_02908 | GCA_900166605_01760 | Unannotated protein; Belongs to the UbiA prenyltransferase family. | Unannotated protein; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate. | 0.820 |
MHA01_08090 | yhjG | GCA_900166605_02908 | GCA_900166605_00582 | Unannotated protein; Belongs to the UbiA prenyltransferase family. | Unannotated protein. | 0.605 |
MHA01_14260 | MHA01_08090 | GCA_900166605_01423 | GCA_900166605_02908 | Unannotated protein. | Unannotated protein; Belongs to the UbiA prenyltransferase family. | 0.605 |
MHA01_14260 | MHA01_24550 | GCA_900166605_01423 | GCA_900166605_01864 | Unannotated protein. | Unannotated protein; Belongs to the UbiD family. | 0.605 |
MHA01_14260 | MHA01_30930 | GCA_900166605_01423 | GCA_900166605_03046 | Unannotated protein. | Unannotated protein. | 0.510 |
MHA01_14260 | bsdB | GCA_900166605_01423 | GCA_900166605_00564 | Unannotated protein. | Unannotated protein; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for phenolic acid decarboxylase. | 0.589 |
MHA01_24550 | MHA01_07660 | GCA_900166605_01864 | GCA_900166605_02865 | Unannotated protein; Belongs to the UbiD family. | Unannotated protein. | 0.718 |
MHA01_24550 | MHA01_08090 | GCA_900166605_01864 | GCA_900166605_02908 | Unannotated protein; Belongs to the UbiD family. | Unannotated protein; Belongs to the UbiA prenyltransferase family. | 0.941 |
MHA01_24550 | MHA01_14260 | GCA_900166605_01864 | GCA_900166605_01423 | Unannotated protein; Belongs to the UbiD family. | Unannotated protein. | 0.605 |
MHA01_24550 | bsdB | GCA_900166605_01864 | GCA_900166605_00564 | Unannotated protein; Belongs to the UbiD family. | Unannotated protein; Involved in the non-oxidative decarboxylation and detoxification of phenolic derivatives. Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for phenolic acid decarboxylase. | 0.971 |
MHA01_24550 | mqnA | GCA_900166605_01864 | GCA_900166605_02907 | Unannotated protein; Belongs to the UbiD family. | Unannotated protein; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2). | 0.813 |
MHA01_24550 | mqnC | GCA_900166605_01864 | GCA_900166605_02007 | Unannotated protein; Belongs to the UbiD family. | Unannotated protein; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2). | 0.790 |
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