STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900166605_01050Unannotated protein. (427 aa)    
Predicted Functional Partners:
GCA_900166605_01052
Unannotated protein.
 
 0.999
msmX
Unannotated protein; Belongs to the ABC transporter superfamily.
 
 0.990
GCA_900166605_01051
Unannotated protein.
 0.988
MHA01_06530
Unannotated protein.
 0.829
MHA01_21410
Unannotated protein.
 0.820
MHA01_05990
Unannotated protein.
 0.810
MHA01_13480
Unannotated protein.
 0.808
glnA
Unannotated protein.
    
   0.798
MHA01_21630
Unannotated protein.
 
 0.792
MHA01_25830
Unannotated protein.
 
 0.787
Your Current Organism:
Marinococcus halophilus
NCBI taxonomy Id: 1371
Other names: ATCC 27964, CCM 2706, CIP 104819, DSM 20408, IAM 12844, JCM 2479, KCTC 2843, LMG 17439, LMG:17439, NBRC 102359, Planococcus halophilus, strain HK 718
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.