Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MHA01_27910 | citA | GCA_900166605_01100 | GCA_900166605_00762 | Unannotated protein. | Unannotated protein; Belongs to the citrate synthase family. | 0.485 |
MHA01_27910 | citZ | GCA_900166605_01100 | GCA_900166605_01993 | Unannotated protein. | Unannotated protein; Belongs to the citrate synthase family. | 0.485 |
MHA01_27910 | csiD | GCA_900166605_01100 | GCA_900166605_01132 | Unannotated protein. | Unannotated protein. | 0.552 |
MHA01_27910 | fumC | GCA_900166605_01100 | GCA_900166605_02172 | Unannotated protein. | Unannotated protein; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.524 |
MHA01_27910 | glcB1 | GCA_900166605_01100 | GCA_900166605_01378 | Unannotated protein. | Unannotated protein; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.454 |
MHA01_27910 | gltA | GCA_900166605_01100 | GCA_900166605_02848 | Unannotated protein. | Unannotated protein. | 0.787 |
MHA01_27910 | mmgD | GCA_900166605_01100 | GCA_900166605_01333 | Unannotated protein. | Unannotated protein; Belongs to the citrate synthase family. | 0.485 |
MHA01_27910 | pckA | GCA_900166605_01100 | GCA_900166605_01856 | Unannotated protein. | Unannotated protein; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. | 0.464 |
MHA01_27910 | pyc | GCA_900166605_01100 | GCA_900166605_02326 | Unannotated protein. | Unannotated protein; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.469 |
MHA01_27910 | ytsJ | GCA_900166605_01100 | GCA_900166605_01986 | Unannotated protein. | Unannotated protein. | 0.452 |
citA | MHA01_27910 | GCA_900166605_00762 | GCA_900166605_01100 | Unannotated protein; Belongs to the citrate synthase family. | Unannotated protein. | 0.485 |
citA | fumC | GCA_900166605_00762 | GCA_900166605_02172 | Unannotated protein; Belongs to the citrate synthase family. | Unannotated protein; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.678 |
citA | glcB1 | GCA_900166605_00762 | GCA_900166605_01378 | Unannotated protein; Belongs to the citrate synthase family. | Unannotated protein; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.718 |
citA | gltA | GCA_900166605_00762 | GCA_900166605_02848 | Unannotated protein; Belongs to the citrate synthase family. | Unannotated protein. | 0.816 |
citA | pckA | GCA_900166605_00762 | GCA_900166605_01856 | Unannotated protein; Belongs to the citrate synthase family. | Unannotated protein; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. | 0.498 |
citA | pyc | GCA_900166605_00762 | GCA_900166605_02326 | Unannotated protein; Belongs to the citrate synthase family. | Unannotated protein; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.581 |
citA | ytsJ | GCA_900166605_00762 | GCA_900166605_01986 | Unannotated protein; Belongs to the citrate synthase family. | Unannotated protein. | 0.598 |
citZ | MHA01_27910 | GCA_900166605_01993 | GCA_900166605_01100 | Unannotated protein; Belongs to the citrate synthase family. | Unannotated protein. | 0.485 |
citZ | fumC | GCA_900166605_01993 | GCA_900166605_02172 | Unannotated protein; Belongs to the citrate synthase family. | Unannotated protein; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.678 |
citZ | glcB1 | GCA_900166605_01993 | GCA_900166605_01378 | Unannotated protein; Belongs to the citrate synthase family. | Unannotated protein; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.718 |
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