STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gabDUnannotated protein. (475 aa)    
Predicted Functional Partners:
gltA
Unannotated protein.
  
 
 0.791
serA
Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.790
MHA01_13050
Unannotated protein.
   
 
 0.780
pyk
Unannotated protein; Belongs to the pyruvate kinase family.
   
 0.756
MHA01_31280
Unannotated protein.
 
 0.754
MHA01_29270
Unannotated protein.
       0.746
MHA01_11090
Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.743
treP
Unannotated protein.
     
 0.719
MHA01_29620
Unannotated protein.
     
 0.719
ptsG
Unannotated protein.
     
 0.719
Your Current Organism:
Marinococcus halophilus
NCBI taxonomy Id: 1371
Other names: ATCC 27964, CCM 2706, CIP 104819, DSM 20408, IAM 12844, JCM 2479, KCTC 2843, LMG 17439, LMG:17439, NBRC 102359, Planococcus halophilus, strain HK 718
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.