Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MHA01_08090 | gldA | GCA_900166605_02908 | GCA_900166605_01526 | Unannotated protein; Belongs to the UbiA prenyltransferase family. | Unannotated protein. | 0.658 |
MHA01_08090 | gpsA | GCA_900166605_02908 | GCA_900166605_02913 | Unannotated protein; Belongs to the UbiA prenyltransferase family. | Unannotated protein; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.418 |
MHA01_08090 | pcrB | GCA_900166605_02908 | GCA_900166605_00825 | Unannotated protein; Belongs to the UbiA prenyltransferase family. | Unannotated protein; Prenyltransferase that catalyzes in vivo the transfer of the heptaprenyl moiety of heptaprenyl pyrophosphate (HepPP; 35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond- formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales. | 0.755 |
MHA01_24080 | gldA | GCA_900166605_01749 | GCA_900166605_01526 | Unannotated protein; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family. | Unannotated protein. | 0.771 |
MHA01_25100 | gldA | GCA_900166605_01905 | GCA_900166605_01526 | Unannotated protein. | Unannotated protein. | 0.657 |
MHA01_29180 | gldA | GCA_900166605_01319 | GCA_900166605_01526 | Unannotated protein. | Unannotated protein. | 0.706 |
MHA01_29180 | glpD | GCA_900166605_01319 | GCA_900166605_03300 | Unannotated protein. | Unannotated protein; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.679 |
MHA01_29180 | ptsI | GCA_900166605_01319 | GCA_900166605_02031 | Unannotated protein. | Unannotated protein; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). | 0.973 |
aroD | gldA | GCA_900166605_01412 | GCA_900166605_01526 | Unannotated protein; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | Unannotated protein. | 0.690 |
gldA | MHA01_08090 | GCA_900166605_01526 | GCA_900166605_02908 | Unannotated protein. | Unannotated protein; Belongs to the UbiA prenyltransferase family. | 0.658 |
gldA | MHA01_24080 | GCA_900166605_01526 | GCA_900166605_01749 | Unannotated protein. | Unannotated protein; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family. | 0.771 |
gldA | MHA01_25100 | GCA_900166605_01526 | GCA_900166605_01905 | Unannotated protein. | Unannotated protein. | 0.657 |
gldA | MHA01_29180 | GCA_900166605_01526 | GCA_900166605_01319 | Unannotated protein. | Unannotated protein. | 0.706 |
gldA | aroD | GCA_900166605_01526 | GCA_900166605_01412 | Unannotated protein. | Unannotated protein; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. | 0.690 |
gldA | glpD | GCA_900166605_01526 | GCA_900166605_03300 | Unannotated protein. | Unannotated protein; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.701 |
gldA | gpsA | GCA_900166605_01526 | GCA_900166605_02913 | Unannotated protein. | Unannotated protein; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.695 |
gldA | mgsA | GCA_900166605_01526 | GCA_900166605_02885 | Unannotated protein. | Unannotated protein; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. | 0.705 |
gldA | pcrB | GCA_900166605_01526 | GCA_900166605_00825 | Unannotated protein. | Unannotated protein; Prenyltransferase that catalyzes in vivo the transfer of the heptaprenyl moiety of heptaprenyl pyrophosphate (HepPP; 35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond- formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales. | 0.722 |
gldA | ptsI | GCA_900166605_01526 | GCA_900166605_02031 | Unannotated protein. | Unannotated protein; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr). | 0.680 |
glpD | MHA01_29180 | GCA_900166605_03300 | GCA_900166605_01319 | Unannotated protein; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. | Unannotated protein. | 0.679 |
page 1 of 2