Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MHA01_01080 | mtaD | GCA_900166605_02251 | GCA_900166605_02252 | Unannotated protein. | Unannotated protein. | 0.556 |
MHA01_05540 | mtaD | GCA_900166605_00534 | GCA_900166605_02252 | Unannotated protein. | Unannotated protein. | 0.667 |
MHA01_05540 | pucC | GCA_900166605_00534 | GCA_900166605_00536 | Unannotated protein. | Unannotated protein. | 0.995 |
MHA01_05540 | pucD | GCA_900166605_00534 | GCA_900166605_00537 | Unannotated protein. | Unannotated protein. | 0.987 |
MHA01_05540 | pucE | GCA_900166605_00534 | GCA_900166605_00538 | Unannotated protein. | Unannotated protein. | 0.986 |
MHA01_13150 | mtaD | GCA_900166605_01536 | GCA_900166605_02252 | Unannotated protein. | Unannotated protein. | 0.568 |
MHA01_27080 | mtaD | GCA_900166605_00012 | GCA_900166605_02252 | Unannotated protein; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | Unannotated protein. | 0.776 |
MHA01_27080 | pyrD | GCA_900166605_00012 | GCA_900166605_02383 | Unannotated protein; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | Unannotated protein; Catalyzes the conversion of dihydroorotate to orotate. | 0.682 |
MHA01_27080 | ribBA | GCA_900166605_00012 | GCA_900166605_02951 | Unannotated protein; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.444 |
MHA01_27080 | upp | GCA_900166605_00012 | GCA_900166605_00351 | Unannotated protein; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | Unannotated protein; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.710 |
mtaD | MHA01_01080 | GCA_900166605_02252 | GCA_900166605_02251 | Unannotated protein. | Unannotated protein. | 0.556 |
mtaD | MHA01_05540 | GCA_900166605_02252 | GCA_900166605_00534 | Unannotated protein. | Unannotated protein. | 0.667 |
mtaD | MHA01_13150 | GCA_900166605_02252 | GCA_900166605_01536 | Unannotated protein. | Unannotated protein. | 0.568 |
mtaD | MHA01_27080 | GCA_900166605_02252 | GCA_900166605_00012 | Unannotated protein. | Unannotated protein; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.776 |
mtaD | pucC | GCA_900166605_02252 | GCA_900166605_00536 | Unannotated protein. | Unannotated protein. | 0.754 |
mtaD | pucD | GCA_900166605_02252 | GCA_900166605_00537 | Unannotated protein. | Unannotated protein. | 0.747 |
mtaD | pucE | GCA_900166605_02252 | GCA_900166605_00538 | Unannotated protein. | Unannotated protein. | 0.705 |
mtaD | pyrD | GCA_900166605_02252 | GCA_900166605_02383 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of dihydroorotate to orotate. | 0.520 |
mtaD | ribBA | GCA_900166605_02252 | GCA_900166605_02951 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.581 |
mtaD | upp | GCA_900166605_02252 | GCA_900166605_00351 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.598 |
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