Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MHA01_03480 | MHA01_24600 | GCA_900166605_02489 | GCA_900166605_01956 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein. | 0.726 |
MHA01_03480 | asd | GCA_900166605_02489 | GCA_900166605_02488 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | 0.987 |
MHA01_03480 | dapA-2 | GCA_900166605_02489 | GCA_900166605_02835 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.745 |
MHA01_03480 | dapB | GCA_900166605_02489 | GCA_900166605_02886 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.854 |
MHA01_03480 | dapF | GCA_900166605_02489 | GCA_900166605_01759 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.778 |
MHA01_03480 | dapH | GCA_900166605_02489 | GCA_900166605_02292 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate. | 0.533 |
MHA01_03480 | hom | GCA_900166605_02489 | GCA_900166605_01750 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein. | 0.917 |
MHA01_03480 | lysA | GCA_900166605_02489 | GCA_900166605_02955 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.901 |
MHA01_24600 | MHA01_03480 | GCA_900166605_01956 | GCA_900166605_02489 | Unannotated protein. | Unannotated protein; Belongs to the aspartokinase family. | 0.726 |
MHA01_24600 | dapA-2 | GCA_900166605_01956 | GCA_900166605_02835 | Unannotated protein. | Unannotated protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.506 |
MHA01_24600 | hom | GCA_900166605_01956 | GCA_900166605_01750 | Unannotated protein. | Unannotated protein. | 0.589 |
MHA01_24600 | yclM | GCA_900166605_01956 | GCA_900166605_02337 | Unannotated protein. | Unannotated protein; Belongs to the aspartokinase family. | 0.726 |
asd | MHA01_03480 | GCA_900166605_02488 | GCA_900166605_02489 | Unannotated protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | Unannotated protein; Belongs to the aspartokinase family. | 0.987 |
asd | dapA-2 | GCA_900166605_02488 | GCA_900166605_02835 | Unannotated protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | Unannotated protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.845 |
asd | dapB | GCA_900166605_02488 | GCA_900166605_02886 | Unannotated protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | Unannotated protein; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.878 |
asd | dapF | GCA_900166605_02488 | GCA_900166605_01759 | Unannotated protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | Unannotated protein; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.831 |
asd | dapH | GCA_900166605_02488 | GCA_900166605_02292 | Unannotated protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | Unannotated protein; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate. | 0.887 |
asd | hom | GCA_900166605_02488 | GCA_900166605_01750 | Unannotated protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | Unannotated protein. | 0.975 |
asd | lysA | GCA_900166605_02488 | GCA_900166605_02955 | Unannotated protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | Unannotated protein; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. | 0.894 |
asd | yclM | GCA_900166605_02488 | GCA_900166605_02337 | Unannotated protein; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. | Unannotated protein; Belongs to the aspartokinase family. | 0.969 |
page 1 of 4