STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0020350Uncharacterized protein. (161 aa)    
Predicted Functional Partners:
chiPu_0011869
DUF5595 domain-containing protein; Belongs to the tetraspanin (TM4SF) family.
   
    0.775
chiPu_0004262
Rho-GAP domain-containing protein.
   
  
 0.767
chiPu_0015611
Uncharacterized protein.
   
    0.763
chiPu_0005590
Protein kinase domain-containing protein.
   
    0.750
chiPu_0017359
Protein kinase domain-containing protein.
   
    0.642
chiPu_0006408
Nbl1_Borealin_N domain-containing protein.
   
    0.617
chiPu_0019760
Uncharacterized protein.
   
  
 0.596
chiPu_0010123
Protein kinase domain-containing protein.
   
    0.583
chiPu_0018903
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
   
    0.566
chiPu_0008388
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
   
    0.566
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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